Bogenhagen's lab >> Links

Mitochondrial Society

• United Mitochondrial Disease Foundation
• Mitochondrial Medicine Society
• Mitochondrial Disorders
• Mitonet: Network for Mitochondrial Medicine
• Mitochondria Research Society
• Mitochondrial Research Interest Group

Major Databases

• Entrez: Life science search engine
• EMBL-EBI: European Bioinformatics Institute
• NGGR: National Center for Genomic Resources
• TIGR: Institute for Genomic Research
• BluePrint: Resource for Biomolecular Data
• GO: Gene Ontology Consortium

Pathway and Regulation

• KEGG: Kyoto Encyclopedia of Genes and Genomes
• Reactome: Knowledgebase of Biological Processes
• TRRD: Transcription Regulatory Region Database
• ExPASY-Biochemical Pahtways
• BioCarta: Pathways and Tools
• RegulonDB: Transcriptional Regulation and Operon Organization Database
• Biocatalysis/BioDegradation Database
• PUMA2: Analysis of Metabolism
• SEED: Interpretation of Genomes

Gene Expression

• Bodymap: Human and Mouse Gene Expression Database
• Emap: Edinburgh Mouse Atlas Project
• ASDB: Alternative Splicing Database
• MIRAGE: Molecular Informatics Resource for the Analysis of Gene Expression
• GeneExpression System

Structure

• RCSB Protein Data Bank
• CATH Protein Structure Classification Database
• SCOP: Structual Classification of Proteins
• ASTRAL: Sequence and Structure Analysis
• Database of Macromolecular Movements
• ProStar: Protein Structure Evaluation and Prediction
• HIC-Up: Hetero-compound Information Centre
• IMB: Image Library of Biological Macromolecules
• ProTherm Database: Thermodynamic Database for Proteins and Mutants
• EPD: Eukaryotic promoter database
• YIDB: Yeast Nuclear and Mitochondrial Intron Database

Protein Datase

• Pfam: Protein Families Database of Alignments and HMMS
• AARS: Aminoacyl-tRNA Synthetases Database
• Endogenous GPCR List
• Esther: Esterases and Hydrolase Enzymes and Relatives
• Nuclear Receptor Resource
• Phospho.ELM: Database of S/T/Y Phosphorylation Sites
• PROLYSIS: Protease and Protease Inhibitor Web Server
• Receptor Database
• PROSITE: Database of Protein Families and Domains
• PIR-ALN: Curated Database of Protein Sequence Alignments
• ProDom: Set of Protein Domain Families
• SMART: Simple Modular Architecture Research Tool
• SYSTERS: Protein Family Database
• REBASE: Restriction Enzyme Database
• SWISS-2DPAGE: Two-dimensional Polyacrylamide Gel Electrophoresis Database
• BioKnowledge Library

RNA Database

• Noncoding RNAs Database
• the European Ribosomal RNA database
• Non-canonical Base Pair Database
• SRPDB: Signal Recognition Particle Database

Genomic Database

• BDGP: Berkeley Drosophila Genome Project
• FlyServer: Drosophila Developement and Genetics
• AceDB: Genomic Database
• MGI: Mouse Genome Informatics
• SGD: Saccharomyces Genome Database
• GOBASE: Organelle Genome Database
• TIGR: TIGR Microbial Database
• ZFIN: Zebrafish Information Network

Interaction

• DRC: Database of Ribosomal Crosslinks
• DIP: Database of Interacting Proteins
• DPInteract: E.Coli DNA-binding Proteins

Others

• DBGET: Integrated Database Retrieval System